Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SKB50245.1 | SKB51309.1 | SAMN05660226_01714 | SAMN05660226_01799 | Succinate dehydrogenase subunit A. | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.448 |
| SKB50245.1 | SKB54901.1 | SAMN05660226_01714 | SAMN05660226_01889 | Succinate dehydrogenase subunit A. | Amino acid adenylation domain-containing protein. | 0.444 |
| SKB50245.1 | SKB56677.1 | SAMN05660226_01714 | SAMN05660226_02027 | Succinate dehydrogenase subunit A. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.752 |
| SKB50245.1 | SKB73977.1 | SAMN05660226_01714 | SAMN05660226_02907 | Succinate dehydrogenase subunit A. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.673 |
| SKB50245.1 | fumC | SAMN05660226_01714 | SAMN05660226_01646 | Succinate dehydrogenase subunit A. | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.972 |
| SKB50245.1 | pckA | SAMN05660226_01714 | SAMN05660226_00945 | Succinate dehydrogenase subunit A. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.515 |
| SKB51309.1 | SKB50245.1 | SAMN05660226_01799 | SAMN05660226_01714 | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Succinate dehydrogenase subunit A. | 0.448 |
| SKB51309.1 | SKB54901.1 | SAMN05660226_01799 | SAMN05660226_01889 | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Amino acid adenylation domain-containing protein. | 0.661 |
| SKB51309.1 | SKB54911.1 | SAMN05660226_01799 | SAMN05660226_01890 | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Amino acid adenylation domain-containing protein. | 0.808 |
| SKB51309.1 | SKB56677.1 | SAMN05660226_01799 | SAMN05660226_02027 | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.803 |
| SKB51309.1 | SKB58061.1 | SAMN05660226_01799 | SAMN05660226_02170 | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Glutamate synthase (NADPH/NADH) large chain. | 0.704 |
| SKB51309.1 | SKB73977.1 | SAMN05660226_01799 | SAMN05660226_02907 | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.903 |
| SKB51309.1 | pckA | SAMN05660226_01799 | SAMN05660226_00945 | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.900 |
| SKB54901.1 | SKB50245.1 | SAMN05660226_01889 | SAMN05660226_01714 | Amino acid adenylation domain-containing protein. | Succinate dehydrogenase subunit A. | 0.444 |
| SKB54901.1 | SKB51309.1 | SAMN05660226_01889 | SAMN05660226_01799 | Amino acid adenylation domain-containing protein. | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.661 |
| SKB54901.1 | SKB54911.1 | SAMN05660226_01889 | SAMN05660226_01890 | Amino acid adenylation domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.999 |
| SKB54901.1 | SKB56677.1 | SAMN05660226_01889 | SAMN05660226_02027 | Amino acid adenylation domain-containing protein. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.744 |
| SKB54901.1 | SKB58061.1 | SAMN05660226_01889 | SAMN05660226_02170 | Amino acid adenylation domain-containing protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.953 |
| SKB54901.1 | SKB73977.1 | SAMN05660226_01889 | SAMN05660226_02907 | Amino acid adenylation domain-containing protein. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.582 |
| SKB54901.1 | fmt | SAMN05660226_01889 | SAMN05660226_01222 | Amino acid adenylation domain-containing protein. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.777 |
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