STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB64922.1cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. (189 aa)    
Predicted Functional Partners:
SKB58061.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.788
SKB64908.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.775
SKB82054.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
  
     0.770
SKB68113.1
Signal transduction histidine kinase.
   
 0.758
SKB82312.1
PAS domain-containing protein.
   
 0.754
SKB57505.1
Signal transduction histidine kinase.
   
 0.713
SKB28812.1
Hypothetical protein.
    
  0.709
SKB55821.1
Adenylate cyclase, class 3.
   
 0.649
SKB44380.1
Helix-turn-helix domain-containing protein.
  
     0.610
SKB73977.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
     
 0.543
Your Current Organism:
Parapedobacter luteus
NCBI taxonomy Id: 623280
Other names: DSM 22899, JCM 15977, KACC 10955, P. luteus, Parapedobacter luteus Kim et al. 2010, Parapedobacter sp. 4M29, strain 4M29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.