STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB69346.1Putative membrane protein. (263 aa)    
Predicted Functional Partners:
SKB69354.1
Uncharacterized membrane protein.
     0.919
SKB69324.1
Hypothetical protein.
 
     0.603
SKB69332.1
Threonine dehydrogenase.
 
     0.576
SKB74319.1
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.531
SKB30772.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.464
SKB98518.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.459
SKB69363.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
       0.425
SKB29258.1
Pyridine nucleotide-disulphide oxidoreductase.
  
     0.415
Your Current Organism:
Parapedobacter luteus
NCBI taxonomy Id: 623280
Other names: DSM 22899, JCM 15977, KACC 10955, P. luteus, Parapedobacter luteus Kim et al. 2010, Parapedobacter sp. 4M29, strain 4M29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.