STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB70259.1FAD/FMN-containing dehydrogenase. (405 aa)    
Predicted Functional Partners:
SKB41280.1
Electron transfer flavoprotein alpha subunit.
  
 
 0.856
SKB41275.1
Electron transfer flavoprotein beta subunit.
  
 
 0.855
SKB29241.1
L-lactate dehydrogenase (cytochrome).
  
 0.822
atpD
F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
     
 0.821
SKB33381.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
    
 0.818
SKB73977.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.818
SKB29451.1
Putative membrane-bound dehydrogenase domain-containing protein.
   
 0.791
SKB58061.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.790
SKB55082.1
UbiA prenyltransferase family protein.
    
 0.778
SKB70286.1
Hypothetical protein.
       0.778
Your Current Organism:
Parapedobacter luteus
NCBI taxonomy Id: 623280
Other names: DSM 22899, JCM 15977, KACC 10955, P. luteus, Parapedobacter luteus Kim et al. 2010, Parapedobacter sp. 4M29, strain 4M29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.