STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB85107.1Hypothetical protein. (318 aa)    
Predicted Functional Partners:
SKB85118.1
Gliding motility-associated protein GldM.
 
   
 0.962
SKB85138.1
Gliding motility-associated protein GldL.
 
   
 0.899
SKB85145.1
Gliding motility-associated lipoprotein GldK/gliding motility-associated lipoprotein GldK,TIGR03529.
 
   
 0.861
SKB29691.1
Gliding motility-associated lipoprotein GldJ.
 
   
 0.815
SKB85167.1
Protein of unknown function.
 
     0.811
SKB58695.1
Outer membrane protein beta-barrel domain-containing protein.
  
   
 0.796
SKB29921.1
Tetratricopeptide repeat-containing protein.
  
   
 0.795
SKB63673.1
Gliding motility-associated lipoprotein GldD.
  
   
 0.794
SKB73959.1
Cell surface protein SprA.
  
   
 0.778
SKB45965.1
Hypothetical protein.
  
     0.774
Your Current Organism:
Parapedobacter luteus
NCBI taxonomy Id: 623280
Other names: DSM 22899, JCM 15977, KACC 10955, P. luteus, Parapedobacter luteus Kim et al. 2010, Parapedobacter sp. 4M29, strain 4M29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.