STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB92858.1ABC-type Fe3+/spermidine/putrescine transport systems, ATPase components. (353 aa)    
Predicted Functional Partners:
macB
Putative ABC transport system ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 
0.934
SKB37629.1
Cell division transport system ATP-binding protein.
 
   
0.929
SKB94527.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
    
0.901
SKB92933.1
ABC-type multidrug transport system, ATPase component.
 
     0.753
SKB74242.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
    
 0.741
SKB92865.1
Outer membrane protein beta-barrel domain-containing protein.
 
  
 0.732
SKB75163.1
ABC-2 type transport system ATP-binding protein.
 
  
 
0.634
SKB92873.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.613
SKB40305.1
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
  
  0.611
SKB34479.1
Putative ABC transport system ATP-binding protein.
 
 
 
0.573
Your Current Organism:
Parapedobacter luteus
NCBI taxonomy Id: 623280
Other names: DSM 22899, JCM 15977, KACC 10955, P. luteus, Parapedobacter luteus Kim et al. 2010, Parapedobacter sp. 4M29, strain 4M29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.