STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB96948.1Monovalent cation:H+ antiporter-2, CPA2 family. (776 aa)    
Predicted Functional Partners:
SKB96968.1
Hypothetical protein.
       0.762
SKB25559.1
Transposase IS66 family protein.
  
  
 0.548
SKB97065.1
Substrate-binding protein-like domain-containing protein.
       0.469
SKB40830.1
NAD(P)H dehydrogenase (quinone).
  
 
 0.447
SKB86721.1
Putative NADPH-quinone reductase (modulator of drug activity B).
  
 
 0.447
SKB30027.1
Monovalent cation:H+ antiporter-2, CPA2 family.
 
  
0.442
SKB82960.1
Trk system potassium uptake protein TrkA.
     
 0.427
SKB55758.1
Chloride channel protein, CIC family.
     
 0.417
SKB28865.1
CDP-alcohol phosphatidyltransferase.
  
     0.403
Your Current Organism:
Parapedobacter luteus
NCBI taxonomy Id: 623280
Other names: DSM 22899, JCM 15977, KACC 10955, P. luteus, Parapedobacter luteus Kim et al. 2010, Parapedobacter sp. 4M29, strain 4M29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.