STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRP54Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (504 aa)    
Predicted Functional Partners:
DNTS_007229
Signal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding.
   
 0.999
DNTS_024145
SRP54 domain-containing protein.
  
0.999
DNTS_021125
TPR_REGION domain-containing protein.
   
 0.999
DNTS_001500
Uncharacterized protein.
    
 0.999
DNTS_014484
Uncharacterized protein.
   
 0.999
DNTS_023494
Uncharacterized protein.
  
 0.995
DNTS_022833
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.994
DNTS_004645
Uncharacterized protein.
  
 
 0.992
DNTS_013767
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.987
DNTS_032502
Ribosomal_L5_C domain-containing protein; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.980
Your Current Organism:
Danionella translucida
NCBI taxonomy Id: 623744
Other names: D. translucida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.