STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNTS_024584Uncharacterized protein. (812 aa)    
Predicted Functional Partners:
DNTS_023972
Uncharacterized protein.
   
 0.875
DNTS_027415
Uncharacterized protein.
   
 0.875
DNTS_008618
Uncharacterized protein.
    
 0.780
DNTS_023043
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
   0.779
DNTS_016621
Uncharacterized protein.
   
 0.754
DNTS_033017
Uncharacterized protein.
   
 0.754
DNTS_011695
Uncharacterized protein.
   
 0.754
DNTS_034805
Uncharacterized protein.
   
 0.725
DNTS_017823
Uncharacterized protein.
    
 0.725
DNTS_008702
Uncharacterized protein.
    
 0.711
Your Current Organism:
Danionella translucida
NCBI taxonomy Id: 623744
Other names: D. translucida
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.