STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNTS_012282Uncharacterized protein. (143 aa)    
Predicted Functional Partners:
DNTS_016277
Uncharacterized protein.
    
 0.730
DNTS_009365
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.653
DNTS_023767
Small nuclear ribonucleoprotein Sm D2.
    
 0.650
DNTS_035240
DNA polymerase.
   
 0.628
DNTS_026605
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.615
DNTS_006387
Sm domain-containing protein.
    
  0.606
DNTS_004999
Small nuclear ribonucleoprotein G.
    
  0.585
DNTS_029397
UBX domain-containing protein 7.
   
 
  0.573
DNTS_003113
Uncharacterized protein.
   
 
 0.551
DNTS_029912
Uncharacterized protein; Belongs to the complex I 49 kDa subunit family.
   
   0.541
Your Current Organism:
Danionella translucida
NCBI taxonomy Id: 623744
Other names: D. translucida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.