DNTS_007011 protein (Danionella translucida)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DNTS_007011

Uncharacterized protein. (295 aa)

Predicted Functional Partners:

DNTS_028560

0.623

DNTS_014147

0.623

DNTS_014143

0.623

DNTS_009865

0.623

DNTS_011873

0.523

DNTS_009619

0.434

DNTS_016387

0.434

DNTS_030048

0.428

DNTS_015975

0.428

DNTS_003867

0.428

Your Current Organism:

Danionella translucida

NCBI taxonomy Id: 623744
Other names: D. translucida

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DNTS_003867	DNTS_007011	A0A553Q131	A0A553QDG3	Protein kinase domain-containing protein.	Uncharacterized protein.	0.428
DNTS_003867	DNTS_009619	A0A553Q131	A0A553PZ74	Protein kinase domain-containing protein.	ETS domain-containing protein.	0.746
DNTS_003867	DNTS_015975	A0A553Q131	A0A553P0R4	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.952
DNTS_003867	DNTS_016387	A0A553Q131	A0A553R5X4	Protein kinase domain-containing protein.	ETS domain-containing protein.	0.545
DNTS_007011	DNTS_003867	A0A553QDG3	A0A553Q131	Uncharacterized protein.	Protein kinase domain-containing protein.	0.428
DNTS_007011	DNTS_009619	A0A553QDG3	A0A553PZ74	Uncharacterized protein.	ETS domain-containing protein.	0.434
DNTS_007011	DNTS_009865	A0A553QDG3	A0A553QQE2	Uncharacterized protein.	Protein kinase C; Belongs to the protein kinase superfamily.	0.623
DNTS_007011	DNTS_011873	A0A553QDG3	A0A553Q7D4	Uncharacterized protein.	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.	0.523
DNTS_007011	DNTS_014143	A0A553QDG3	A0A553PZU8	Uncharacterized protein.	Phorbol-ester/DAG-type domain-containing protein.	0.623
DNTS_007011	DNTS_014147	A0A553QDG3	A0A553PZT5	Uncharacterized protein.	PB1 domain-containing protein.	0.623
DNTS_007011	DNTS_015975	A0A553QDG3	A0A553P0R4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.428
DNTS_007011	DNTS_016387	A0A553QDG3	A0A553R5X4	Uncharacterized protein.	ETS domain-containing protein.	0.434
DNTS_007011	DNTS_028560	A0A553QDG3	A0A553MSV1	Uncharacterized protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.623
DNTS_007011	DNTS_030048	A0A553QDG3	A0A553MZH1	Uncharacterized protein.	Mitogen-activated protein kinase.	0.428
DNTS_009619	DNTS_003867	A0A553PZ74	A0A553Q131	ETS domain-containing protein.	Protein kinase domain-containing protein.	0.746
DNTS_009619	DNTS_007011	A0A553PZ74	A0A553QDG3	ETS domain-containing protein.	Uncharacterized protein.	0.434
DNTS_009619	DNTS_015975	A0A553PZ74	A0A553P0R4	ETS domain-containing protein.	Protein kinase domain-containing protein.	0.891
DNTS_009619	DNTS_016387	A0A553PZ74	A0A553R5X4	ETS domain-containing protein.	ETS domain-containing protein.	0.878
DNTS_009619	DNTS_030048	A0A553PZ74	A0A553MZH1	ETS domain-containing protein.	Mitogen-activated protein kinase.	0.746
DNTS_009865	DNTS_007011	A0A553QQE2	A0A553QDG3	Protein kinase C; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.623