STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNTS_016686J domain-containing protein. (283 aa)    
Predicted Functional Partners:
DNTS_021423
Uncharacterized protein.
  
 
0.885
DNTS_023972
Uncharacterized protein.
    
 0.873
DNTS_027415
Uncharacterized protein.
    
 0.873
DNTS_024839
Ribosomal_L16 domain-containing protein.
    
 0.825
DNTS_034805
Uncharacterized protein.
    
 0.814
DNTS_024781
RING-type domain-containing protein.
  
 0.770
DNTS_002802
GRASP55_65 domain-containing protein.
   
 0.764
DNTS_015378
GRASP55_65 domain-containing protein.
   
 0.764
DNTS_004301
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
    
 0.757
DNTS_005948
Uncharacterized protein.
   
 0.673
Your Current Organism:
Danionella translucida
NCBI taxonomy Id: 623744
Other names: D. translucida
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