Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DNTS_001318 | DNTS_016943 | A0A553Q3T3 | A0A553QG18 | YL1_C domain-containing protein. | Uncharacterized protein. | 0.962 |
DNTS_001318 | DNTS_020773 | A0A553Q3T3 | A0A553MPD1 | YL1_C domain-containing protein. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.997 |
DNTS_001318 | DNTS_024409 | A0A553Q3T3 | A0A553N205 | YL1_C domain-containing protein. | Uncharacterized protein. | 0.978 |
DNTS_016943 | DNTS_001318 | A0A553QG18 | A0A553Q3T3 | Uncharacterized protein. | YL1_C domain-containing protein. | 0.962 |
DNTS_016943 | DNTS_020773 | A0A553QG18 | A0A553MPD1 | Uncharacterized protein. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.949 |
DNTS_016943 | DNTS_020869 | A0A553QG18 | A0A553QLI8 | Uncharacterized protein. | CYCLIN domain-containing protein; Belongs to the cyclin family. | 0.962 |
DNTS_016943 | DNTS_021782 | A0A553QG18 | A0A553R855 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.944 |
DNTS_016943 | DNTS_024409 | A0A553QG18 | A0A553N205 | Uncharacterized protein. | Uncharacterized protein. | 0.970 |
DNTS_016943 | DNTS_032856 | A0A553QG18 | A0A553QTR4 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.947 |
DNTS_016943 | DNTS_035817 | A0A553QG18 | A0A553Q3E8 | Uncharacterized protein. | Uncharacterized protein. | 0.950 |
DNTS_016943 | MED15 | A0A553QG18 | A0A553N5V1 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.951 |
DNTS_016943 | MED17 | A0A553QG18 | A0A553Q0B2 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.975 |
DNTS_016943 | MED4 | A0A553QG18 | A0A553N1D6 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.971 |
DNTS_020773 | DNTS_001318 | A0A553MPD1 | A0A553Q3T3 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | YL1_C domain-containing protein. | 0.997 |
DNTS_020773 | DNTS_016943 | A0A553MPD1 | A0A553QG18 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | Uncharacterized protein. | 0.949 |
DNTS_020773 | DNTS_024409 | A0A553MPD1 | A0A553N205 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | Uncharacterized protein. | 0.956 |
DNTS_020869 | DNTS_016943 | A0A553QLI8 | A0A553QG18 | CYCLIN domain-containing protein; Belongs to the cyclin family. | Uncharacterized protein. | 0.962 |
DNTS_020869 | DNTS_021782 | A0A553QLI8 | A0A553R855 | CYCLIN domain-containing protein; Belongs to the cyclin family. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.978 |
DNTS_020869 | DNTS_032856 | A0A553QLI8 | A0A553QTR4 | CYCLIN domain-containing protein; Belongs to the cyclin family. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.982 |
DNTS_020869 | DNTS_035817 | A0A553QLI8 | A0A553Q3E8 | CYCLIN domain-containing protein; Belongs to the cyclin family. | Uncharacterized protein. | 0.963 |
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