DNTS_023796 protein (Danionella translucida)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DNTS_023796

Uncharacterized protein. (930 aa)

Predicted Functional Partners:

DNTS_001979

0.777

DNTS_013665

0.688

DNTS_032427

0.496

DNTS_000001

0.496

DNTS_022299

0.412

DNTS_022300

0.412

AK3

0.412

DNTS_025415

0.412

DNTS_012848

0.412

CMPK1

0.412

Your Current Organism:

Danionella translucida

NCBI taxonomy Id: 623744
Other names: D. translucida

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AK3	CMPK1	A0A553NMY1	A0A553R5U4	GTP:AMP phosphotransferase AK3, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	0.793
AK3	DNTS_012848	A0A553NMY1	A0A553QTN5	GTP:AMP phosphotransferase AK3, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.	Uncharacterized protein; Belongs to the adenylate kinase family.	0.485
AK3	DNTS_022299	A0A553NMY1	A0A553MRK9	GTP:AMP phosphotransferase AK3, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.	Uncharacterized protein; Belongs to the adenylate kinase family.	0.793
AK3	DNTS_022300	A0A553NMY1	A0A553MRM7	GTP:AMP phosphotransferase AK3, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.	Uncharacterized protein; Belongs to the adenylate kinase family.	0.793
AK3	DNTS_023796	A0A553NMY1	A0A553QQG1	GTP:AMP phosphotransferase AK3, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.	Uncharacterized protein.	0.412
AK3	DNTS_025415	A0A553NMY1	A0A553Q306	GTP:AMP phosphotransferase AK3, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.	ADK_lid domain-containing protein; Belongs to the adenylate kinase family.	0.861
CMPK1	AK3	A0A553R5U4	A0A553NMY1	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	GTP:AMP phosphotransferase AK3, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.	0.793
CMPK1	DNTS_012848	A0A553R5U4	A0A553QTN5	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	Uncharacterized protein; Belongs to the adenylate kinase family.	0.749
CMPK1	DNTS_022299	A0A553R5U4	A0A553MRK9	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	Uncharacterized protein; Belongs to the adenylate kinase family.	0.750
CMPK1	DNTS_022300	A0A553R5U4	A0A553MRM7	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	Uncharacterized protein; Belongs to the adenylate kinase family.	0.723
CMPK1	DNTS_023796	A0A553R5U4	A0A553QQG1	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	Uncharacterized protein.	0.412
CMPK1	DNTS_025415	A0A553R5U4	A0A553Q306	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	ADK_lid domain-containing protein; Belongs to the adenylate kinase family.	0.613
DNTS_000001	DNTS_023796	A0A553QIJ9	A0A553QQG1	Uncharacterized protein.	Uncharacterized protein.	0.496
DNTS_001979	DNTS_023796	A0A553RAH4	A0A553QQG1	Uncharacterized protein.	Uncharacterized protein.	0.777
DNTS_012848	AK3	A0A553QTN5	A0A553NMY1	Uncharacterized protein; Belongs to the adenylate kinase family.	GTP:AMP phosphotransferase AK3, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.	0.485
DNTS_012848	CMPK1	A0A553QTN5	A0A553R5U4	Uncharacterized protein; Belongs to the adenylate kinase family.	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	0.749
DNTS_012848	DNTS_022299	A0A553QTN5	A0A553MRK9	Uncharacterized protein; Belongs to the adenylate kinase family.	Uncharacterized protein; Belongs to the adenylate kinase family.	0.844
DNTS_012848	DNTS_022300	A0A553QTN5	A0A553MRM7	Uncharacterized protein; Belongs to the adenylate kinase family.	Uncharacterized protein; Belongs to the adenylate kinase family.	0.844
DNTS_012848	DNTS_023796	A0A553QTN5	A0A553QQG1	Uncharacterized protein; Belongs to the adenylate kinase family.	Uncharacterized protein.	0.412
DNTS_012848	DNTS_025415	A0A553QTN5	A0A553Q306	Uncharacterized protein; Belongs to the adenylate kinase family.	ADK_lid domain-containing protein; Belongs to the adenylate kinase family.	0.864