DNTS_017814 protein (Danionella translucida)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DNTS_017814

Uncharacterized protein. (237 aa)

Predicted Functional Partners:

DNTS_003516

0.774

DNTS_009337

0.674

DNTS_003421

0.632

DNTS_009246

0.632

DNTS_028626

0.603

DNTS_020399

0.594

DNTS_026209

0.549

DNTS_029670

0.532

DNTS_006366

0.532

DNTS_025858

0.520

Your Current Organism:

Danionella translucida

NCBI taxonomy Id: 623744
Other names: D. translucida

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DNTS_003421	DNTS_003516	A0A553PR92	A0A553MTW3	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	J domain-containing protein.	0.640
DNTS_003421	DNTS_009246	A0A553PR92	A0A553Q5I2	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Uncharacterized protein.	0.799
DNTS_003421	DNTS_009337	A0A553PR92	A0A553QCI9	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	DUF3395 domain-containing protein.	0.542
DNTS_003421	DNTS_017814	A0A553PR92	A0A553R064	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Uncharacterized protein.	0.632
DNTS_003421	DNTS_025858	A0A553PR92	A0A553NA71	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.897
DNTS_003421	DNTS_026209	A0A553PR92	A0A553R0I1	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	MICOS complex subunit MIC10; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.887
DNTS_003516	DNTS_003421	A0A553MTW3	A0A553PR92	J domain-containing protein.	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.640
DNTS_003516	DNTS_009246	A0A553MTW3	A0A553Q5I2	J domain-containing protein.	Uncharacterized protein.	0.665
DNTS_003516	DNTS_017814	A0A553MTW3	A0A553R064	J domain-containing protein.	Uncharacterized protein.	0.774
DNTS_003516	DNTS_020399	A0A553MTW3	A0A553QMZ9	J domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.880
DNTS_003516	DNTS_025858	A0A553MTW3	A0A553NA71	J domain-containing protein.	MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.555
DNTS_003516	DNTS_026209	A0A553MTW3	A0A553R0I1	J domain-containing protein.	MICOS complex subunit MIC10; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.655
DNTS_006366	DNTS_017814	A0A553RMQ4	A0A553R064	Uncharacterized protein.	Uncharacterized protein.	0.532
DNTS_009246	DNTS_003421	A0A553Q5I2	A0A553PR92	Uncharacterized protein.	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.799
DNTS_009246	DNTS_003516	A0A553Q5I2	A0A553MTW3	Uncharacterized protein.	J domain-containing protein.	0.665
DNTS_009246	DNTS_009337	A0A553Q5I2	A0A553QCI9	Uncharacterized protein.	DUF3395 domain-containing protein.	0.530
DNTS_009246	DNTS_017814	A0A553Q5I2	A0A553R064	Uncharacterized protein.	Uncharacterized protein.	0.632
DNTS_009246	DNTS_025858	A0A553Q5I2	A0A553NA71	Uncharacterized protein.	MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.644
DNTS_009246	DNTS_026209	A0A553Q5I2	A0A553R0I1	Uncharacterized protein.	MICOS complex subunit MIC10; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.598
DNTS_009337	DNTS_003421	A0A553QCI9	A0A553PR92	DUF3395 domain-containing protein.	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.542