STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNTS_011103SH3 domain-containing protein. (1812 aa)    
Predicted Functional Partners:
DNTS_017018
WD_REPEATS_REGION domain-containing protein.
    
 0.824
DNTS_006575
Fam20C domain-containing protein.
    
  0.615
DNTS_029571
ARID domain-containing protein.
    
 0.603
DNTS_017513
ARID domain-containing protein.
    
 0.603
DNTS_017624
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 0.580
DNTS_007944
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 0.580
DNTS_024781
RING-type domain-containing protein.
   
 0.564
DNTS_012167
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.544
DNTS_027464
Uncharacterized protein.
    
 0.542
DNTS_025166
Uncharacterized protein.
    
 
 0.528
Your Current Organism:
Danionella translucida
NCBI taxonomy Id: 623744
Other names: D. translucida
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