STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG15852Protein CBG15852. (204 aa)    
Predicted Functional Partners:
CBG06844
Protein CBG06844.
    
 0.512
daf-15
Protein CBR-DAF-15.
    
 0.499
tkt-1
Protein CBR-TKT-1.
   
 
 0.452
CBG07019
Protein CBG07019.
    
 0.451
aakb-1
Protein CBR-AAKB-1.
    
 0.451
CBG11004
Protein CBG11004.
    
 0.451
aakb-2
Protein CBR-AAKB-2.
    
 0.451
CBG21773
Protein CBG21773.
    
 0.451
ppm-1.a
Protein CBR-PPM-1.
   
 0.449
CBG00206
Protein CBG00206; Belongs to the protein kinase superfamily.
   
 0.444
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.