STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hum-6Unconventional myosin heavy chain 6; Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments (By similarity). Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2099 aa)    
Predicted Functional Partners:
eps-8
Protein CBR-EPS-8.
   
 0.783
cmd-1
Protein CBR-CMD-1; Belongs to the calmodulin family.
    
 0.745
act-5
Protein CBR-ACT-5.
    
 0.736
twf-2
Protein CBG16364.
   
 
 0.716
ccdc-47
Protein CBR-CCDC-47.
      
 0.685
tmc-2
Protein CBR-TMC-2.
   
  
 0.679
unc-40
Protein CBR-UNC-40.
    
 0.652
CBG13201
Protein CBG13201.
      
 0.634
CBG17372
Protein CBG17372.
    
 
 0.542
CBG00760
Protein CBG00760.
    
 0.533
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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