STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tct-1Translationally-controlled tumor protein homolog; Involved in calcium binding and microtubule stabilization. Belongs to the TCTP family. (181 aa)    
Predicted Functional Partners:
eef-1g
Protein CBR-EEF-1G.
   
 
 0.998
rps-30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.983
rla-0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
 
 
 
 0.971
eef-1b.1
Protein CBR-EEF-1B.1; Belongs to the EF-1-beta/EF-1-delta family.
  
 
 0.971
rps-14
Protein CBR-RPS-14; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.961
rps-16
Protein CBR-RPS-16; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.957
rack-1
Protein CBR-RACK-1.
   
 
 0.955
rpl-9
Protein CBR-RPL-9.
   
 
 0.953
Cbr-eef-1B.2
Protein CBR-EEF-1B.2; Belongs to the EF-1-beta/EF-1-delta family.
  
 
 0.941
rpl-30
Protein CBR-RPL-30.
   
 
 0.939
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.