STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG03556Leishmanolysin-like peptidase; Metalloprotease. (663 aa)    
Predicted Functional Partners:
CBG09318
Protein CBG09318.
   
  
 0.642
CBG11315
Protein CBG11315.
   
  
 0.642
mapk-15
Mitogen-activated protein kinase.
      
 0.633
CBG16208
Protein CBG16208; Belongs to the glycosyl hydrolase 29 family.
      
 0.582
alfa-1
Protein CBG13024.
    
 
 0.570
Cbr-srg-54
Serpentine receptor class gamma; Belongs to the peptidase M10A family.
      
 0.531
zmp-5
Protein CBG00098.
      
 0.530
CBG19225
Protein CBG19225.
   
  
 0.413
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.