Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ctf-4 | evl-18 | A8Y4S7 | A8X8B8 | Protein CBG23065. | Protein CBG09214. | 0.992 |
ctf-4 | mcm-2 | A8Y4S7 | A8XTB1 | Protein CBG23065. | DNA helicase; Belongs to the MCM family. | 0.995 |
ctf-4 | mcm-3 | A8Y4S7 | A8XDJ5 | Protein CBG23065. | Protein CBR-MCM-3; Belongs to the MCM family. | 0.996 |
ctf-4 | mcm-4 | A8Y4S7 | A8WVP0 | Protein CBG23065. | DNA helicase; Belongs to the MCM family. | 0.996 |
ctf-4 | mcm-6 | A8Y4S7 | Q61J08 | Protein CBG23065. | DNA replication licensing factor mcm-6; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentia [...] | 0.994 |
ctf-4 | mcm-7 | A8Y4S7 | A8Y108 | Protein CBG23065. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.992 |
ctf-4 | psf-3 | A8Y4S7 | A8WZ83 | Protein CBG23065. | Protein CBG05113. | 0.982 |
ctf-4 | sld-5 | A8Y4S7 | A8XGN5 | Protein CBG23065. | DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. | 0.989 |
ctf-4 | tim-1 | A8Y4S7 | A8WVE9 | Protein CBG23065. | Protein CBR-TIM-1. | 0.985 |
ctf-4 | tipn-1 | A8Y4S7 | Q61XH2 | Protein CBG23065. | Protein TIPIN homolog; Required for normal progression of S-phase. Important for cell survival after DNA damage or replication stress. Belongs to the CSM3 family. | 0.985 |
evl-18 | ctf-4 | A8X8B8 | A8Y4S7 | Protein CBG09214. | Protein CBG23065. | 0.992 |
evl-18 | mcm-2 | A8X8B8 | A8XTB1 | Protein CBG09214. | DNA helicase; Belongs to the MCM family. | 0.999 |
evl-18 | mcm-3 | A8X8B8 | A8XDJ5 | Protein CBG09214. | Protein CBR-MCM-3; Belongs to the MCM family. | 0.997 |
evl-18 | mcm-4 | A8X8B8 | A8WVP0 | Protein CBG09214. | DNA helicase; Belongs to the MCM family. | 0.999 |
evl-18 | mcm-6 | A8X8B8 | Q61J08 | Protein CBG09214. | DNA replication licensing factor mcm-6; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentia [...] | 0.999 |
evl-18 | mcm-7 | A8X8B8 | A8Y108 | Protein CBG09214. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.998 |
evl-18 | psf-3 | A8X8B8 | A8WZ83 | Protein CBG09214. | Protein CBG05113. | 0.996 |
evl-18 | sld-5 | A8X8B8 | A8XGN5 | Protein CBG09214. | DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. | 0.995 |
evl-18 | tim-1 | A8X8B8 | A8WVE9 | Protein CBG09214. | Protein CBR-TIM-1. | 0.983 |
evl-18 | tipn-1 | A8X8B8 | Q61XH2 | Protein CBG09214. | Protein TIPIN homolog; Required for normal progression of S-phase. Important for cell survival after DNA damage or replication stress. Belongs to the CSM3 family. | 0.980 |
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