Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBG02642 | CBG02643 | A8WTU7 | A8WTU6 | Protein CBG02642. | Protein CBG02643. | 0.547 |
CBG02642 | CBG22500 | A8WTU7 | A8Y2E9 | Protein CBG02642. | Protein CBG22500. | 0.998 |
CBG02642 | atp-1 | A8WTU7 | A8X784 | Protein CBG02642. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
CBG02642 | atp-3 | A8WTU7 | A8XFI8 | Protein CBG02642. | Protein CBR-ATP-3. | 0.998 |
CBG02642 | atp-5 | A8WTU7 | A8Y4P2 | Protein CBG02642. | Protein CBR-ATP-5. | 0.997 |
CBG02642 | atp6 | A8WTU7 | Q8HEC5 | Protein CBG02642. | ATP synthase subunit a; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subuni [...] | 0.998 |
CBG02642 | rbr-2 | A8WTU7 | Q61T02 | Protein CBG02642. | Lysine-specific demethylase rbr-2; Histone demethylase that specifically demethylates 'Lys-4' of histone H3, thereby playing a central role in histone code. Does not demethylate histone H3 'Lys-9', H3 'Lys-27', H3 'Lys-36', H3 'Lys-79' or H4 'Lys-20'. Demethylates trimethylated and dimethylated but not monomethylated H3 'Lys-4'. Involved in larval development and vulva formation (By similarity). | 0.822 |
CBG02642 | vha-4 | A8WTU7 | A8WSC9 | Protein CBG02642. | Protein CBR-VHA-4. | 0.895 |
CBG02643 | CBG02642 | A8WTU6 | A8WTU7 | Protein CBG02643. | Protein CBG02642. | 0.547 |
CBG02643 | CBG22500 | A8WTU6 | A8Y2E9 | Protein CBG02643. | Protein CBG22500. | 0.998 |
CBG02643 | atp-1 | A8WTU6 | A8X784 | Protein CBG02643. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
CBG02643 | atp-3 | A8WTU6 | A8XFI8 | Protein CBG02643. | Protein CBR-ATP-3. | 0.998 |
CBG02643 | atp-5 | A8WTU6 | A8Y4P2 | Protein CBG02643. | Protein CBR-ATP-5. | 0.997 |
CBG02643 | atp6 | A8WTU6 | Q8HEC5 | Protein CBG02643. | ATP synthase subunit a; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subuni [...] | 0.998 |
CBG02643 | rbr-2 | A8WTU6 | Q61T02 | Protein CBG02643. | Lysine-specific demethylase rbr-2; Histone demethylase that specifically demethylates 'Lys-4' of histone H3, thereby playing a central role in histone code. Does not demethylate histone H3 'Lys-9', H3 'Lys-27', H3 'Lys-36', H3 'Lys-79' or H4 'Lys-20'. Demethylates trimethylated and dimethylated but not monomethylated H3 'Lys-4'. Involved in larval development and vulva formation (By similarity). | 0.822 |
CBG02643 | vha-4 | A8WTU6 | A8WSC9 | Protein CBG02643. | Protein CBR-VHA-4. | 0.895 |
CBG18192 | ash-2 | A8XT84 | A8XZ73 | Protein CBG18192. | Protein CBR-ASH-2. | 0.999 |
CBG18192 | rbr-2 | A8XT84 | Q61T02 | Protein CBG18192. | Lysine-specific demethylase rbr-2; Histone demethylase that specifically demethylates 'Lys-4' of histone H3, thereby playing a central role in histone code. Does not demethylate histone H3 'Lys-9', H3 'Lys-27', H3 'Lys-36', H3 'Lys-79' or H4 'Lys-20'. Demethylates trimethylated and dimethylated but not monomethylated H3 'Lys-4'. Involved in larval development and vulva formation (By similarity). | 0.812 |
CBG22500 | CBG02642 | A8Y2E9 | A8WTU7 | Protein CBG22500. | Protein CBG02642. | 0.998 |
CBG22500 | CBG02643 | A8Y2E9 | A8WTU6 | Protein CBG22500. | Protein CBG02643. | 0.998 |
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