STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyn-9Peptidyl-prolyl cis-trans isomerase 9; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imid ic peptide bonds in oligopeptides. Thought to function as a catalyst in the folding and modification of cuticle collagens (By similarity). (313 aa)    
Predicted Functional Partners:
daf-41
Protein CBG21192.
   
 0.875
npp-11
Protein CBR-NPP-11.
   
 0.866
ahsa-1
Protein CBG11571.
   
 
 0.855
hsp-75
Protein CBG00585.
  
 0.847
daf-21
Heat shock protein 90; Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co- chaperones that modulate its substrate recognition, ATPase cycle and chaperone function. By stabilizing the receptor-type guanylate cyclase daf-11 or another sig [...]
  
 0.847
dnj-13
Protein CBR-DNJ-13.
  
 
 0.799
sti-1
Protein CBR-STI-1.
  
 
 0.770
prp-19
Protein CBG21324.
   
 0.710
prp-17
Protein CBR-PRP-17.
   
 0.701
syf-1
Protein CBG11979.
    
 0.692
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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