STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl-35Probable 39S ribosomal protein L35, mitochondrial. (158 aa)    
Predicted Functional Partners:
mrps-14
Protein CBR-MRPS-14.
   
   0.953
mrpl-13
Protein CBR-MRPL-13.
   
 
 0.945
mrpl-20
Protein CBR-MRPL-20.
   
 
 0.939
mrpl-51
39S ribosomal protein L51, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL51 family.
   
   0.939
mrpl-9
Protein CBR-MRPL-9.
   
   0.938
mrpl-49
Protein CBR-MRPL-49.
   
   0.932
mrps-30
Protein CBR-MRPS-30.
   
 
 0.932
mrpl-30
Protein CBR-MRPL-30.
   
 
 0.927
mrpl-10
Protein CBR-MRPL-10.
   
 
 0.924
mrpl-12
Protein CBG18325.
   
 
 0.924
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.