STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ceh-24Homeobox protein ceh-24; Probable transcriptional regulator that is required in neural development for the normal formation of sublateral cholinergic motor neuron processes. Plays a role in regulating the expression of acetylcholine transporter protein unc-17 in the sublateral processes. In particular, it is required in sublateral motor neurons for a left- right turning behavior that occurs during the lethargus phase of the normal sleep process called 'flipping'. During 'flipping' animals rotate 180 degrees about their longitudinal axis. (293 aa)    
Predicted Functional Partners:
nhr-27
Protein CBR-NHR-27.
  
 
 0.687
nhr-228
Protein CBR-NHR-228.
    
 
 0.641
CBG14129
Protein CBG14129.
      
 0.640
gei-3
Protein CBR-GEI-3.
      
 0.626
tbx-43
Protein CBR-TBX-43.
   
 
 0.564
ceh-32
Protein CBR-CEH-32.
  
  
 0.534
CBG17293
Protein CBG17293.
      
 0.518
mef-2
Protein CBR-MEF-2.
    
 
 0.490
Cbr-pax-2
Protein CBR-PAX-2, isoform a.
  
 
 0.479
pax-1
Protein CBR-PAX-1.
  
   
 0.478
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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