Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBG00958 | CBG13978 | A8WP86 | A8XIW7 | Protein CBG00958. | Protein CBG13978. | 0.929 |
CBG00958 | arch-1 | A8WP86 | Q61DI9 | Protein CBG00958. | Protein archease-like; Component of the tRNA-splicing ligase complex required to facilitate the enzymatic turnover of catalytic subunit RtcB. | 0.758 |
CBG00958 | rtcb-1 | A8WP86 | A8Y1R5 | Protein CBG00958. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | 0.958 |
CBG00958 | tofu-2 | A8WP86 | A8XUP7 | Protein CBG00958. | Protein CBG19064. | 0.929 |
CBG02251 | CBG12335 | A8WS64 | A8XFL0 | Protein CBG02251. | Protein CBG12335. | 0.862 |
CBG02251 | arch-1 | A8WS64 | Q61DI9 | Protein CBG02251. | Protein archease-like; Component of the tRNA-splicing ligase complex required to facilitate the enzymatic turnover of catalytic subunit RtcB. | 0.642 |
CBG02251 | brf-1 | A8WS64 | A8XH51 | Protein CBG02251. | Protein CBR-BRF-1. | 0.862 |
CBG02251 | maf-1 | A8WS64 | B0K063 | Protein CBG02251. | Protein CBR-MAF-1. | 0.777 |
CBG12335 | CBG02251 | A8XFL0 | A8WS64 | Protein CBG12335. | Protein CBG02251. | 0.862 |
CBG12335 | arch-1 | A8XFL0 | Q61DI9 | Protein CBG12335. | Protein archease-like; Component of the tRNA-splicing ligase complex required to facilitate the enzymatic turnover of catalytic subunit RtcB. | 0.740 |
CBG12335 | brf-1 | A8XFL0 | A8XH51 | Protein CBG12335. | Protein CBR-BRF-1. | 0.875 |
CBG12335 | maf-1 | A8XFL0 | B0K063 | Protein CBG12335. | Protein CBR-MAF-1. | 0.844 |
CBG12465 | arch-1 | A8XFI0 | Q61DI9 | RNA helicase. | Protein archease-like; Component of the tRNA-splicing ligase complex required to facilitate the enzymatic turnover of catalytic subunit RtcB. | 0.550 |
CBG12465 | erfa-1 | A8XFI0 | A8XUD8 | RNA helicase. | Protein CBR-ETF-1. | 0.430 |
CBG13978 | CBG00958 | A8XIW7 | A8WP86 | Protein CBG13978. | Protein CBG00958. | 0.929 |
CBG13978 | arch-1 | A8XIW7 | Q61DI9 | Protein CBG13978. | Protein archease-like; Component of the tRNA-splicing ligase complex required to facilitate the enzymatic turnover of catalytic subunit RtcB. | 0.558 |
CBG13978 | rtcb-1 | A8XIW7 | A8Y1R5 | Protein CBG13978. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | 0.900 |
arch-1 | CBG00958 | Q61DI9 | A8WP86 | Protein archease-like; Component of the tRNA-splicing ligase complex required to facilitate the enzymatic turnover of catalytic subunit RtcB. | Protein CBG00958. | 0.758 |
arch-1 | CBG02251 | Q61DI9 | A8WS64 | Protein archease-like; Component of the tRNA-splicing ligase complex required to facilitate the enzymatic turnover of catalytic subunit RtcB. | Protein CBG02251. | 0.642 |
arch-1 | CBG12335 | Q61DI9 | A8XFL0 | Protein archease-like; Component of the tRNA-splicing ligase complex required to facilitate the enzymatic turnover of catalytic subunit RtcB. | Protein CBG12335. | 0.740 |
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