Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBG02300 | pgam-5 | A8WUN0 | Q61CA3 | Protein CBG02300. | Serine/threonine-protein phosphatase Pgam5, mitochondrial; Displays phosphatase activity for serine/threonine residues. Has apparently no phosphoglycerate mutase activity (By similarity). Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | 0.632 |
| CBG02961 | pgam-5 | A8WT40 | Q61CA3 | UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily. | Serine/threonine-protein phosphatase Pgam5, mitochondrial; Displays phosphatase activity for serine/threonine residues. Has apparently no phosphoglycerate mutase activity (By similarity). Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | 0.632 |
| atg-5 | ced-9 | A8Y1N5 | P41957 | Autophagy protein 5; Involved in autophagic vesicle formation. | Apoptosis regulator ced-9; Plays a major role in programmed cell death (PCD, apoptosis). egl-1 binds to and directly inhibits the activity of ced-9, releasing the cell death activator ced-4 from a ced-9/ced-4 containing protein complex and allowing ced-4 to activate the cell-killing caspase ced-3. During larval development, required for the elimination of transient presynaptic components downstream of egl-1 and upstream of ced-4 and ced-3 apoptotic pathway. | 0.540 |
| atg-5 | fis-1 | A8Y1N5 | A8XCJ8 | Autophagy protein 5; Involved in autophagic vesicle formation. | Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. | 0.643 |
| atg-5 | fndc-1 | A8Y1N5 | A8WT57 | Autophagy protein 5; Involved in autophagic vesicle formation. | Protein CBG02943. | 0.705 |
| atg-5 | pgam-5 | A8Y1N5 | Q61CA3 | Autophagy protein 5; Involved in autophagic vesicle formation. | Serine/threonine-protein phosphatase Pgam5, mitochondrial; Displays phosphatase activity for serine/threonine residues. Has apparently no phosphoglycerate mutase activity (By similarity). Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | 0.512 |
| atg-5 | phb-2 | A8Y1N5 | A8WTY0 | Autophagy protein 5; Involved in autophagic vesicle formation. | Prohibitin. | 0.632 |
| atg-5 | pink-1 | A8Y1N5 | A8WUG0 | Autophagy protein 5; Involved in autophagic vesicle formation. | Protein CBR-PINK-1. | 0.585 |
| atg-5 | rom-5 | A8Y1N5 | A8XL49 | Autophagy protein 5; Involved in autophagic vesicle formation. | Protein CBR-ROM-5. | 0.436 |
| ced-9 | atg-5 | P41957 | A8Y1N5 | Apoptosis regulator ced-9; Plays a major role in programmed cell death (PCD, apoptosis). egl-1 binds to and directly inhibits the activity of ced-9, releasing the cell death activator ced-4 from a ced-9/ced-4 containing protein complex and allowing ced-4 to activate the cell-killing caspase ced-3. During larval development, required for the elimination of transient presynaptic components downstream of egl-1 and upstream of ced-4 and ced-3 apoptotic pathway. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.540 |
| ced-9 | pgam-5 | P41957 | Q61CA3 | Apoptosis regulator ced-9; Plays a major role in programmed cell death (PCD, apoptosis). egl-1 binds to and directly inhibits the activity of ced-9, releasing the cell death activator ced-4 from a ced-9/ced-4 containing protein complex and allowing ced-4 to activate the cell-killing caspase ced-3. During larval development, required for the elimination of transient presynaptic components downstream of egl-1 and upstream of ced-4 and ced-3 apoptotic pathway. | Serine/threonine-protein phosphatase Pgam5, mitochondrial; Displays phosphatase activity for serine/threonine residues. Has apparently no phosphoglycerate mutase activity (By similarity). Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | 0.500 |
| ced-9 | pink-1 | P41957 | A8WUG0 | Apoptosis regulator ced-9; Plays a major role in programmed cell death (PCD, apoptosis). egl-1 binds to and directly inhibits the activity of ced-9, releasing the cell death activator ced-4 from a ced-9/ced-4 containing protein complex and allowing ced-4 to activate the cell-killing caspase ced-3. During larval development, required for the elimination of transient presynaptic components downstream of egl-1 and upstream of ced-4 and ced-3 apoptotic pathway. | Protein CBR-PINK-1. | 0.538 |
| fis-1 | atg-5 | A8XCJ8 | A8Y1N5 | Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.643 |
| fis-1 | fndc-1 | A8XCJ8 | A8WT57 | Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. | Protein CBG02943. | 0.634 |
| fis-1 | pgam-5 | A8XCJ8 | Q61CA3 | Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. | Serine/threonine-protein phosphatase Pgam5, mitochondrial; Displays phosphatase activity for serine/threonine residues. Has apparently no phosphoglycerate mutase activity (By similarity). Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | 0.641 |
| fis-1 | phb-2 | A8XCJ8 | A8WTY0 | Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. | Prohibitin. | 0.660 |
| fis-1 | pink-1 | A8XCJ8 | A8WUG0 | Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. | Protein CBR-PINK-1. | 0.461 |
| fis-1 | rom-4 | A8XCJ8 | A8WMV2 | Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. | Protein CBR-ROM-4. | 0.464 |
| fis-1 | rom-5 | A8XCJ8 | A8XL49 | Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. | Protein CBR-ROM-5. | 0.544 |
| fndc-1 | atg-5 | A8WT57 | A8Y1N5 | Protein CBG02943. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.705 |
page 1 of 3