STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrps-10Probable 28S ribosomal protein S10, mitochondrial. (158 aa)    
Predicted Functional Partners:
mrps-2
Protein CBR-MRPS-2.
  
 0.999
dap-3
Protein CBR-DAP-3.
   
 0.999
mrps-16
Protein CBR-MRPS-16.
  
 0.999
mrps-6
Protein CBR-MRPS-6.
  
 0.999
mrps-15
Protein CBR-MRPS-15.
  
 0.999
mrps-9
Protein CBR-MRPS-9.
  
 0.999
mrps-14
Protein CBR-MRPS-14.
  
 0.999
rps-30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
mrps-5
Putative 28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
  
 0.999
mrps-35
Protein CBR-MRPS-35.
   
 0.998
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.