Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBG14703 | mec-10 | A8XKH6 | Q60NC0 | Protein CBG14703. | Degenerin mec-10; Amiloride-sensitive sodium channel subunit required for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. | 0.999 |
CBG14703 | mec-3 | A8XKH6 | P34764 | Protein CBG14703. | Mechanosensory protein 3; Specifies differentiation of the set of six touch receptor neurons. Binds cooperatively as a heterodimer with unc-86 to sites in the mec-3 gene promoter. | 0.502 |
CBG14703 | mec-4 | A8XKH6 | Q17298 | Protein CBG14703. | Degenerin mec-4; Probable sodium channel subunit. May be needed for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. | 0.999 |
CBG14703 | mec-5 | A8XKH6 | A8XNC0 | Protein CBG14703. | Protein CBR-MEC-5. | 0.864 |
CBG14703 | mec-6 | A8XKH6 | A8XGE3 | Protein CBG14703. | Protein CBR-MEC-6. | 0.999 |
CBG14703 | mec-7 | A8XKH6 | Q17299 | Protein CBG14703. | Tubulin beta-1 chain; Tubulin is the major constituent of microtubules (Probable). It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (Probable). Plays a role in mechanosensory transduction (touch sensitivity) (By similarity). | 0.774 |
CBG14703 | mec-9 | A8XKH6 | A8XVJ4 | Protein CBG14703. | Protein CBR-MEC-9. | 0.864 |
CBG14703 | trp-4 | A8XKH6 | A8XIB6 | Protein CBG14703. | Protein CBR-TRP-4; Belongs to the transient receptor (TC 1.A.4) family. | 0.679 |
mec-10 | CBG14703 | Q60NC0 | A8XKH6 | Degenerin mec-10; Amiloride-sensitive sodium channel subunit required for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. | Protein CBG14703. | 0.999 |
mec-10 | mec-3 | Q60NC0 | P34764 | Degenerin mec-10; Amiloride-sensitive sodium channel subunit required for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. | Mechanosensory protein 3; Specifies differentiation of the set of six touch receptor neurons. Binds cooperatively as a heterodimer with unc-86 to sites in the mec-3 gene promoter. | 0.728 |
mec-10 | mec-4 | Q60NC0 | Q17298 | Degenerin mec-10; Amiloride-sensitive sodium channel subunit required for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. | Degenerin mec-4; Probable sodium channel subunit. May be needed for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. | 0.990 |
mec-10 | mec-5 | Q60NC0 | A8XNC0 | Degenerin mec-10; Amiloride-sensitive sodium channel subunit required for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. | Protein CBR-MEC-5. | 0.894 |
mec-10 | mec-6 | Q60NC0 | A8XGE3 | Degenerin mec-10; Amiloride-sensitive sodium channel subunit required for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. | Protein CBR-MEC-6. | 0.999 |
mec-10 | mec-7 | Q60NC0 | Q17299 | Degenerin mec-10; Amiloride-sensitive sodium channel subunit required for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. | Tubulin beta-1 chain; Tubulin is the major constituent of microtubules (Probable). It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (Probable). Plays a role in mechanosensory transduction (touch sensitivity) (By similarity). | 0.816 |
mec-10 | mec-9 | Q60NC0 | A8XVJ4 | Degenerin mec-10; Amiloride-sensitive sodium channel subunit required for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. | Protein CBR-MEC-9. | 0.922 |
mec-10 | sto-5 | Q60NC0 | A8XNT2 | Degenerin mec-10; Amiloride-sensitive sodium channel subunit required for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. | Protein CBR-STO-5. | 0.893 |
mec-10 | sto-6 | Q60NC0 | A8XQR5 | Degenerin mec-10; Amiloride-sensitive sodium channel subunit required for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. | Protein CBR-STO-6. | 0.898 |
mec-10 | trp-4 | Q60NC0 | A8XIB6 | Degenerin mec-10; Amiloride-sensitive sodium channel subunit required for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. | Protein CBR-TRP-4; Belongs to the transient receptor (TC 1.A.4) family. | 0.863 |
mec-3 | CBG14703 | P34764 | A8XKH6 | Mechanosensory protein 3; Specifies differentiation of the set of six touch receptor neurons. Binds cooperatively as a heterodimer with unc-86 to sites in the mec-3 gene promoter. | Protein CBG14703. | 0.502 |
mec-3 | mec-10 | P34764 | Q60NC0 | Mechanosensory protein 3; Specifies differentiation of the set of six touch receptor neurons. Binds cooperatively as a heterodimer with unc-86 to sites in the mec-3 gene promoter. | Degenerin mec-10; Amiloride-sensitive sodium channel subunit required for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. | 0.728 |
page 1 of 5