Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dlg-1 | let-23 | A8XKG7 | A8WPC3 | Protein CBR-DLG-1; Belongs to the MAGUK family. | Receptor protein-tyrosine kinase. | 0.444 |
dlg-1 | let-60 | A8XKG7 | A8X0X5 | Protein CBR-DLG-1; Belongs to the MAGUK family. | Protein CBR-LET-60. | 0.477 |
dlg-1 | ral-1 | A8XKG7 | A8XMJ1 | Protein CBR-DLG-1; Belongs to the MAGUK family. | Protein CBR-RAL-1. | 0.477 |
dlg-1 | soc-2 | A8XKG7 | A8XWW4 | Protein CBR-DLG-1; Belongs to the MAGUK family. | Leucine-rich repeat protein soc-2; Acts as a Ras effector and participates in MAPK pathway activation. Probably acts as a regulatory subunit of protein phosphatase that specifically dephosphorylates Raf kinase and stimulates Raf activity at specialized signaling complexes upon Ras activation. Required for vulval development. Involved in fluid homeostasis. Plays a role in nicotinic acetylcholine receptor (nAChR)- mediated sensitivity to nicotine; Belongs to the SHOC2 family. | 0.682 |
dlg-1 | unc-43 | A8XKG7 | A8WXF6 | Protein CBR-DLG-1; Belongs to the MAGUK family. | Calcium/calmodulin-dependent protein kinase type II; Role in locomotion and neuronal cell fate specification. Required for the regulation of synaptic density, egg laying, defecation, and meiotic maturation. Required for viability under chronic osmotic stress in which it acts downstream of osr-1. Regulates the synaptic trafficking of glr-1. Bidirectional modulator of neurotransmitter release with negative modulatory effects mainly mediated via slo-1 activation. May suppress the functional response to an internal pacemaker, perhaps by modulating the activity of the IP3 receptor (By simil [...] | 0.785 |
ksr-1 | let-60 | A8Y314 | A8X0X5 | Protein CBR-KSR-1. | Protein CBR-LET-60. | 0.861 |
ksr-1 | lin-45 | A8Y314 | Q61UC4 | Protein CBR-KSR-1. | Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1. | 0.894 |
ksr-1 | ral-1 | A8Y314 | A8XMJ1 | Protein CBR-KSR-1. | Protein CBR-RAL-1. | 0.701 |
ksr-1 | ras-2 | A8Y314 | A8XSS4 | Protein CBR-KSR-1. | Protein CBR-RAS-2. | 0.625 |
ksr-1 | sem-5 | A8Y314 | A8XPY6 | Protein CBR-KSR-1. | Protein CBR-SEM-5. | 0.724 |
ksr-1 | soc-2 | A8Y314 | A8XWW4 | Protein CBR-KSR-1. | Leucine-rich repeat protein soc-2; Acts as a Ras effector and participates in MAPK pathway activation. Probably acts as a regulatory subunit of protein phosphatase that specifically dephosphorylates Raf kinase and stimulates Raf activity at specialized signaling complexes upon Ras activation. Required for vulval development. Involved in fluid homeostasis. Plays a role in nicotinic acetylcholine receptor (nAChR)- mediated sensitivity to nicotine; Belongs to the SHOC2 family. | 0.736 |
let-23 | dlg-1 | A8WPC3 | A8XKG7 | Receptor protein-tyrosine kinase. | Protein CBR-DLG-1; Belongs to the MAGUK family. | 0.444 |
let-23 | let-60 | A8WPC3 | A8X0X5 | Receptor protein-tyrosine kinase. | Protein CBR-LET-60. | 0.956 |
let-23 | lin-45 | A8WPC3 | Q61UC4 | Receptor protein-tyrosine kinase. | Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1. | 0.667 |
let-23 | ral-1 | A8WPC3 | A8XMJ1 | Receptor protein-tyrosine kinase. | Protein CBR-RAL-1. | 0.754 |
let-23 | ras-2 | A8WPC3 | A8XSS4 | Receptor protein-tyrosine kinase. | Protein CBR-RAS-2. | 0.518 |
let-23 | sem-5 | A8WPC3 | A8XPY6 | Receptor protein-tyrosine kinase. | Protein CBR-SEM-5. | 0.999 |
let-23 | soc-2 | A8WPC3 | A8XWW4 | Receptor protein-tyrosine kinase. | Leucine-rich repeat protein soc-2; Acts as a Ras effector and participates in MAPK pathway activation. Probably acts as a regulatory subunit of protein phosphatase that specifically dephosphorylates Raf kinase and stimulates Raf activity at specialized signaling complexes upon Ras activation. Required for vulval development. Involved in fluid homeostasis. Plays a role in nicotinic acetylcholine receptor (nAChR)- mediated sensitivity to nicotine; Belongs to the SHOC2 family. | 0.767 |
let-60 | dlg-1 | A8X0X5 | A8XKG7 | Protein CBR-LET-60. | Protein CBR-DLG-1; Belongs to the MAGUK family. | 0.477 |
let-60 | ksr-1 | A8X0X5 | A8Y314 | Protein CBR-LET-60. | Protein CBR-KSR-1. | 0.861 |
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