STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttll-12Tubulin--tyrosine ligase-like protein 12; Regulates microtubule dynamics in uterine muscle cells. (672 aa)    
Predicted Functional Partners:
ttll-15
Protein CBR-TTLL-15.
      
 0.866
ttll-9
Protein CBR-TTLL-9.
    
 
0.826
ccpp-1
Protein CBR-CCPP-1.
      
 0.777
ttll-5
Protein CBR-TTLL-5.
      
 0.777
ccpp-6
Protein CBR-CCPP-6.
      
 0.744
dnj-1
Protein CBR-DNJ-1.
    
 
 0.673
klp-13
Protein CBR-KLP-13; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.638
ttll-11
Protein CBR-TTLL-11.
      
0.525
CBG18274
Protein-lysine N-methyltransferase CBG18274; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM5 family.
    
   0.479
ttll-4
Tubulin polyglutamylase ttll-4; Polyglutamylase involved in side-chain polyglutamylation of tubulin in sensory cilia. Together with ttll-5 and ttll-11, required for male mating.
      
 0.450
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.