Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBG11892 | CBG21813 | A8XE89 | A8Y0V6 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | Protein CBG21813. | 0.660 |
CBG11892 | elpc-2 | A8XE89 | A8WVC4 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | Protein CBR-ELPC-2. | 0.426 |
CBG11892 | elpc-3 | A8XE89 | Q60LW7 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. The elongator complex is required for multiple tRNA modifications, including mcm5U (5-methoxycarbonylmethyl uridine), mcm5s2U (5-methoxycarbonylmethyl-2-thiouridine), and ncm5U (5- carbamoylmethyl uridine) (By similarity). In the elongator complex, acts as a tRNA uridine(34) acetyltransferase by mediating formation of carboxymethyluridine in the wobble base at po [...] | 0.786 |
CBG21524 | CBG21771 | A8Y0B3 | A8Y0I8 | Protein CBG21524. | Protein CBG21771. | 0.797 |
CBG21524 | dph-3 | A8Y0B3 | A8Y2T3 | Protein CBG21524. | Protein CBR-DPH-3. | 0.582 |
CBG21524 | elpc-1 | A8Y0B3 | A8XBW0 | Protein CBG21524. | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | 0.815 |
CBG21524 | elpc-2 | A8Y0B3 | A8WVC4 | Protein CBG21524. | Protein CBR-ELPC-2. | 0.824 |
CBG21524 | elpc-3 | A8Y0B3 | Q60LW7 | Protein CBG21524. | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. The elongator complex is required for multiple tRNA modifications, including mcm5U (5-methoxycarbonylmethyl uridine), mcm5s2U (5-methoxycarbonylmethyl-2-thiouridine), and ncm5U (5- carbamoylmethyl uridine) (By similarity). In the elongator complex, acts as a tRNA uridine(34) acetyltransferase by mediating formation of carboxymethyluridine in the wobble base at po [...] | 0.918 |
CBG21524 | elpc-4 | A8Y0B3 | Q60ZM2 | Protein CBG21524. | Putative elongator complex protein 4; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. The elongator complex catalyzes formation of carboxymethyluridine in the wobble base at position 34 in tRNAs; Belongs to the ELP4 family. | 0.662 |
CBG21524 | tsp-17 | A8Y0B3 | A8XJM8 | Protein CBG21524. | Tetraspanin. | 0.553 |
CBG21524 | tut-1 | A8Y0B3 | A8WR63 | Protein CBG21524. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. | 0.606 |
CBG21771 | CBG21524 | A8Y0I8 | A8Y0B3 | Protein CBG21771. | Protein CBG21524. | 0.797 |
CBG21771 | dph-3 | A8Y0I8 | A8Y2T3 | Protein CBG21771. | Protein CBR-DPH-3. | 0.515 |
CBG21771 | elpc-1 | A8Y0I8 | A8XBW0 | Protein CBG21771. | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | 0.980 |
CBG21771 | elpc-2 | A8Y0I8 | A8WVC4 | Protein CBG21771. | Protein CBR-ELPC-2. | 0.960 |
CBG21771 | elpc-3 | A8Y0I8 | Q60LW7 | Protein CBG21771. | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. The elongator complex is required for multiple tRNA modifications, including mcm5U (5-methoxycarbonylmethyl uridine), mcm5s2U (5-methoxycarbonylmethyl-2-thiouridine), and ncm5U (5- carbamoylmethyl uridine) (By similarity). In the elongator complex, acts as a tRNA uridine(34) acetyltransferase by mediating formation of carboxymethyluridine in the wobble base at po [...] | 0.980 |
CBG21771 | elpc-4 | A8Y0I8 | Q60ZM2 | Protein CBG21771. | Putative elongator complex protein 4; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. The elongator complex catalyzes formation of carboxymethyluridine in the wobble base at position 34 in tRNAs; Belongs to the ELP4 family. | 0.991 |
CBG21771 | tut-1 | A8Y0I8 | A8WR63 | Protein CBG21771. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. | 0.684 |
CBG21813 | CBG11892 | A8Y0V6 | A8XE89 | Protein CBG21813. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.660 |
CBG21813 | elpc-2 | A8Y0V6 | A8WVC4 | Protein CBG21813. | Protein CBR-ELPC-2. | 0.437 |
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