STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbh-1Tyramine beta-hydroxylase; Converts tyramine into octopamine, a neurotransmitter involved in pharyngeal pumping and egg laying. (585 aa)    
Predicted Functional Partners:
skpo-1
Protein CBG00649.
   
  
 0.981
CBG01935
Protein CBG01935.
   
    0.981
cht-3
Protein CBG05746; Belongs to the glycosyl hydrolase 18 family.
   
    0.981
ule-3
Protein CBG09707.
   
    0.981
CBG09706
Protein CBG09706.
   
    0.981
CBG16702
Protein CBG16702.
   
    0.981
bas-1
Protein CBR-BAS-1.
   
 
 0.972
tdc-1
Protein CBR-TDC-1.
   
 
 0.926
CBG15573
Protein CBG15573.
   
    0.879
tph-1
Protein CBR-TPH-1.
   
  
 0.806
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.