STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0205.13Uncharacterized protein. (99 aa)    
Predicted Functional Partners:
F18E3.12
Uncharacterized protein.
   
  
 0.853
col-122
Col_cuticle_N domain-containing protein.
      
 0.816
C06B3.6
Uncharacterized protein.
      
 0.811
F09F7.6
Uncharacterized protein.
      
 0.809
spch-1
SPerm CHromatin enriched.
      
 0.802
col-123
Col_cuticle_N domain-containing protein.
      
 0.758
col-140
Col_cuticle_N domain-containing protein.
      
 0.699
bli-6
Col_cuticle_N domain-containing protein.
      
 0.617
vit-5
Vitellogenin-5; Precursor of the egg-yolk proteins that are sources of nutrients during embryonic development.
      
 0.414
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.