B0228.1 protein (Caenorhabditis elegans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B0228.1

Uncharacterized protein B0228.1. (224 aa)

Predicted Functional Partners:

dyf-19

0.453

Y73F4A.2

0.447

F35B12.3

0.431

Your Current Organism:

Caenorhabditis elegans

NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0228.1	F35B12.3	B0228.1.1	F35B12.3.1	Uncharacterized protein B0228.1.	Uncharacterized protein.	0.431
B0228.1	Y73F4A.2	B0228.1.1	Y73F4A.2.1	Uncharacterized protein B0228.1.	DOMON domain-containing protein Y73F4A.2.	0.447
B0228.1	dyf-19	B0228.1.1	Y43F8C.4.1	Uncharacterized protein B0228.1.	Uncharacterized protein.	0.453
F35B12.3	B0228.1	F35B12.3.1	B0228.1.1	Uncharacterized protein.	Uncharacterized protein B0228.1.	0.431
F35B12.3	Y73F4A.2	F35B12.3.1	Y73F4A.2.1	Uncharacterized protein.	DOMON domain-containing protein Y73F4A.2.	0.549
Y73F4A.2	B0228.1	Y73F4A.2.1	B0228.1.1	DOMON domain-containing protein Y73F4A.2.	Uncharacterized protein B0228.1.	0.447
Y73F4A.2	F35B12.3	Y73F4A.2.1	F35B12.3.1	DOMON domain-containing protein Y73F4A.2.	Uncharacterized protein.	0.549
dyf-19	B0228.1	Y43F8C.4.1	B0228.1.1	Uncharacterized protein.	Uncharacterized protein B0228.1.	0.453