Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| col-17 | dpy-13 | F11G11.10.2 | F30B5.1.1 | COLlagen. | Cuticle collagen dpy-13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-13 affects the body shape. | 0.873 |
| col-17 | dpy-4 | F11G11.10.2 | Y41E3.2.1 | COLlagen. | Col_cuticle_N domain-containing protein. | 0.712 |
| col-17 | dpy-5 | F11G11.10.2 | F27C1.8.1 | COLlagen. | Cuticle collagen dpy-5; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.593 |
| col-17 | dpy-8 | F11G11.10.2 | C31H2.2.1 | COLlagen. | Col_cuticle_N domain-containing protein. | 0.647 |
| col-17 | dpy-9 | F11G11.10.2 | T21D12.2a.1 | COLlagen. | Col_cuticle_N domain-containing protein. | 0.500 |
| col-17 | lon-3 | F11G11.10.2 | ZK836.1.1 | COLlagen. | Cuticle collagen lon-3; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Dose-dependent regulator of body length and shape. | 0.670 |
| col-17 | rol-6 | F11G11.10.2 | T01B7.7.2 | COLlagen. | Cuticle collagen rol-6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Involved in body morphogenesis. | 0.652 |
| col-17 | rol-8 | F11G11.10.2 | ZK1290.3a.1 | COLlagen. | Cuticle collagen 6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.868 |
| col-17 | sqt-1 | F11G11.10.2 | B0491.2.1 | COLlagen. | Cuticle collagen sqt-1; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. This is a collagen critical for organismal morphogenesis. Mutations in sqt-1 can lengthen, shorten, or helically twist the entire animal. | 0.944 |
| col-17 | sqt-2 | F11G11.10.2 | C01B12.1.1 | COLlagen. | Col_cuticle_N domain-containing protein. | 0.723 |
| dpy-13 | col-17 | F30B5.1.1 | F11G11.10.2 | Cuticle collagen dpy-13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-13 affects the body shape. | COLlagen. | 0.873 |
| dpy-13 | dpy-4 | F30B5.1.1 | Y41E3.2.1 | Cuticle collagen dpy-13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-13 affects the body shape. | Col_cuticle_N domain-containing protein. | 0.852 |
| dpy-13 | dpy-5 | F30B5.1.1 | F27C1.8.1 | Cuticle collagen dpy-13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-13 affects the body shape. | Cuticle collagen dpy-5; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.700 |
| dpy-13 | dpy-8 | F30B5.1.1 | C31H2.2.1 | Cuticle collagen dpy-13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-13 affects the body shape. | Col_cuticle_N domain-containing protein. | 0.573 |
| dpy-13 | dpy-9 | F30B5.1.1 | T21D12.2a.1 | Cuticle collagen dpy-13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-13 affects the body shape. | Col_cuticle_N domain-containing protein. | 0.403 |
| dpy-13 | lon-3 | F30B5.1.1 | ZK836.1.1 | Cuticle collagen dpy-13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-13 affects the body shape. | Cuticle collagen lon-3; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Dose-dependent regulator of body length and shape. | 0.627 |
| dpy-13 | rol-6 | F30B5.1.1 | T01B7.7.2 | Cuticle collagen dpy-13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-13 affects the body shape. | Cuticle collagen rol-6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Involved in body morphogenesis. | 0.627 |
| dpy-13 | rol-8 | F30B5.1.1 | ZK1290.3a.1 | Cuticle collagen dpy-13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-13 affects the body shape. | Cuticle collagen 6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.634 |
| dpy-13 | sqt-1 | F30B5.1.1 | B0491.2.1 | Cuticle collagen dpy-13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-13 affects the body shape. | Cuticle collagen sqt-1; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. This is a collagen critical for organismal morphogenesis. Mutations in sqt-1 can lengthen, shorten, or helically twist the entire animal. | 0.657 |
| dpy-13 | sqt-2 | F30B5.1.1 | C01B12.1.1 | Cuticle collagen dpy-13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-13 affects the body shape. | Col_cuticle_N domain-containing protein. | 0.627 |
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