STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C01G10.7HpcH_HpaI domain-containing protein. (324 aa)    
Predicted Functional Partners:
C24D10.4
Uncharacterized protein.
   
  
 0.821
F54D10.5
Uncharacterized protein.
   
  
 0.817
dhs-22
DeHydrogenases, Short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.801
F49C12.9
UBA domain-containing protein.
   
 
 0.773
trpp-5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi; Belongs to the TRAPP small subunits family. BET3 subfamily.
   
  
 0.763
hsp-110
Heat shock protein 110.
  
 0.749
D1007.8
Uncharacterized protein.
   
  
 0.739
K05C4.7
Armadillo repeat-containing protein 1.
   
 
 0.738
C39E9.12
SAP domain-containing protein.
   
  
 0.733
C28A5.1
Uncharacterized protein.
  
  
 0.732
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.