STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C02F5.3Uncharacterized GTP-binding protein C02F5.3; Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. (366 aa)    
Predicted Functional Partners:
T26E3.4
RWD domain-containing protein.
   
 
 0.995
F27D4.4
Zinc finger CCCH domain-containing protein 15 homolog; Belongs to the ZC3H15/TMA46 family.
   
 
 0.958
gcn-1
TOG domain-containing protein.
   
 
 0.938
C24H12.4
Helicase C-terminal domain-containing protein.
   
   0.854
rps-3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.797
Y37E3.8
Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.783
rps-30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.759
rps-20
Ribosomal_S10 domain-containing protein.
   
   0.735
rps-2
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.730
rps-15
40S ribosomal protein S15; Negatively regulates lifespan.
   
   0.730
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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