STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C03A3.3Lactamase_B domain-containing protein. (287 aa)    
Predicted Functional Partners:
F46C5.2
Uncharacterized protein F46C5.2.
   
  
 0.893
poml-1
PON (Paraoxonase) and MEC-6 Like.
   
  
 0.813
nlp-69
Neuropeptide-Like Protein.
      
 0.811
alr-1
Homeobox domain-containing protein.
      
 0.651
mce-1
Mitochondrial methylmalonyl-CoA epimerase.
  
 
 0.641
glod-4
Glyoxalase 1; Thought to act as a glyoxalase. May remove methylglyoxal from mitochondrial proteins. Has roles in reducing oxidative stress and increasing lifespan.
  
 
 0.628
icl-1
Bifunctional glyoxylate cycle protein; In the C-terminal section; belongs to the malate synthase family.
  
  
 0.606
C17H12.2
Uncharacterized protein.
      
 0.522
F54D5.12
FAD-binding PCMH-type domain-containing protein.
    
 0.481
eef-1G
Probable elongation factor 1-gamma; Probably plays a role in anchoring the complex to other cellular components.
     
 0.474
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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