Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C03H5.3 | C16C10.2 | C03H5.3a.1 | C16C10.2.1 | Uncharacterized protein. | Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.418 |
C03H5.3 | C56A3.5 | C03H5.3a.1 | C56A3.5.2 | Uncharacterized protein. | Uncharacterized protein. | 0.412 |
C03H5.3 | F10E7.5 | C03H5.3a.1 | F10E7.5.1 | Uncharacterized protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.446 |
C03H5.3 | F53H1.3 | C03H5.3a.1 | F53H1.3a.1 | Uncharacterized protein. | UDENN domain-containing protein. | 0.702 |
C03H5.3 | aka-1 | C03H5.3a.1 | D1022.7b.2 | Uncharacterized protein. | FYVE-type domain-containing protein. | 0.583 |
C03H5.3 | ari-2 | C03H5.3a.1 | T12E12.1.1 | Uncharacterized protein. | Potential E3 ubiquitin-protein ligase ariadne-2; Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes, such as UBC-2/UBE2L3, and then transfers it to substrates. Belongs to the RBR family. Ariadne subfamily. | 0.663 |
C03H5.3 | ent-5 | C03H5.3a.1 | F16H11.3.1 | Uncharacterized protein. | Equilibrative Nucleoside Transporter. | 0.586 |
C03H5.3 | lbp-6 | C03H5.3a.1 | W02D3.5.1 | Uncharacterized protein. | Fatty acid-binding protein homolog 6. | 0.467 |
C03H5.3 | rbpl-1 | C03H5.3a.1 | F36F2.3a.1 | Uncharacterized protein. | Retinoblastoma Binding Protein Like. | 0.589 |
C16C10.2 | C03H5.3 | C16C10.2.1 | C03H5.3a.1 | Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Uncharacterized protein. | 0.418 |
C16C10.2 | F10E7.5 | C16C10.2.1 | F10E7.5.1 | Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.787 |
C56A3.5 | C03H5.3 | C56A3.5.2 | C03H5.3a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.412 |
C56A3.5 | F10E7.5 | C56A3.5.2 | F10E7.5.1 | Uncharacterized protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.400 |
F10E7.5 | C03H5.3 | F10E7.5.1 | C03H5.3a.1 | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | Uncharacterized protein. | 0.446 |
F10E7.5 | C16C10.2 | F10E7.5.1 | C16C10.2.1 | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.787 |
F10E7.5 | C56A3.5 | F10E7.5.1 | C56A3.5.2 | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | Uncharacterized protein. | 0.400 |
F53H1.3 | C03H5.3 | F53H1.3a.1 | C03H5.3a.1 | UDENN domain-containing protein. | Uncharacterized protein. | 0.702 |
F53H1.3 | aka-1 | F53H1.3a.1 | D1022.7b.2 | UDENN domain-containing protein. | FYVE-type domain-containing protein. | 0.631 |
F53H1.3 | ari-2 | F53H1.3a.1 | T12E12.1.1 | UDENN domain-containing protein. | Potential E3 ubiquitin-protein ligase ariadne-2; Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes, such as UBC-2/UBE2L3, and then transfers it to substrates. Belongs to the RBR family. Ariadne subfamily. | 0.670 |
F53H1.3 | ent-5 | F53H1.3a.1 | F16H11.3.1 | UDENN domain-containing protein. | Equilibrative Nucleoside Transporter. | 0.706 |
page 1 of 2