Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Y105E8A.1 | ikb-1 | Y105E8A.1b.1 | C04F12.3.1 | Glutaredoxin domain-containing protein. | ANK_REP_REGION domain-containing protein. | 0.623 |
| Y105E8A.1 | set-29 | Y105E8A.1b.1 | Y92H12BR.6.1 | Glutaredoxin domain-containing protein. | SET domain-containing protein. | 0.808 |
| apl-1 | ikb-1 | C42D8.8a.1 | C04F12.3.1 | Amyloid-beta-like protein; Required for normal developmental progression throughout all life stages. Specifically required for the molt stage during all larval transitions and morphogenesis. Acts with heterochronic genes, including members of the let-7 family, to regulate larval stage to adult transition. Acts synergistically with acn-1 in let-7 regulated postembryonic cell division of hypodermal seam cells. Acts in multiple pathways to influence daf-12 and daf-16 activity to in turn regulate physiological and reproductive processes such as body size and egg- laying. May play a role in [...] | ANK_REP_REGION domain-containing protein. | 0.704 |
| ikb-1 | Y105E8A.1 | C04F12.3.1 | Y105E8A.1b.1 | ANK_REP_REGION domain-containing protein. | Glutaredoxin domain-containing protein. | 0.623 |
| ikb-1 | apl-1 | C04F12.3.1 | C42D8.8a.1 | ANK_REP_REGION domain-containing protein. | Amyloid-beta-like protein; Required for normal developmental progression throughout all life stages. Specifically required for the molt stage during all larval transitions and morphogenesis. Acts with heterochronic genes, including members of the let-7 family, to regulate larval stage to adult transition. Acts synergistically with acn-1 in let-7 regulated postembryonic cell division of hypodermal seam cells. Acts in multiple pathways to influence daf-12 and daf-16 activity to in turn regulate physiological and reproductive processes such as body size and egg- laying. May play a role in [...] | 0.704 |
| ikb-1 | malt-1 | C04F12.3.1 | F22D3.6.1 | ANK_REP_REGION domain-containing protein. | MALT1 paracaspase homolog. | 0.640 |
| ikb-1 | ned-8 | C04F12.3.1 | F45H11.2.1 | ANK_REP_REGION domain-containing protein. | NEDD8; Ubiquitin-like protein which plays an important role in cell cycle control and embryogenesis. Covalent attachment to its substrates requires prior activation by the E1 complex uba-3-ula-1 and linkage to the E2 enzyme ubc-12. Attachment of ned-8 to cullins activates their associated E3 ubiquitin ligase activity, and thus promotes polyubiquitination and proteasomal degradation of cyclins and other regulatory proteins. | 0.618 |
| ikb-1 | pik-1 | C04F12.3.1 | K09B11.1a.2 | ANK_REP_REGION domain-containing protein. | Pelle-like serine/threonine-protein kinase pik-1; Through association with the adapter actl-1, may act downstream of the receptor complex composed of ilcr-1 and ilcr-2, which is a signaling complex that modulates neuronal activity and animal behavior in response to sensory neuron input. | 0.923 |
| ikb-1 | prk-2 | C04F12.3.1 | F45H7.4.2 | ANK_REP_REGION domain-containing protein. | Serine/threonine-protein kinase prk-2; Involved in the negative regulation of synaptic differentiation in PLM neurons; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. PIM subfamily. | 0.652 |
| ikb-1 | set-29 | C04F12.3.1 | Y92H12BR.6.1 | ANK_REP_REGION domain-containing protein. | SET domain-containing protein. | 0.618 |
| ikb-1 | tol-1 | C04F12.3.1 | C07F11.1.1 | ANK_REP_REGION domain-containing protein. | TIR domain-containing protein. | 0.909 |
| ikb-1 | trf-1 | C04F12.3.1 | F45G2.6.1 | ANK_REP_REGION domain-containing protein. | TNF Receptor Associated Factor (TRAF) homolog. | 0.912 |
| ikb-1 | ubq-2 | C04F12.3.1 | ZK1010.1.1 | ANK_REP_REGION domain-containing protein. | Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] | 0.645 |
| malt-1 | ikb-1 | F22D3.6.1 | C04F12.3.1 | MALT1 paracaspase homolog. | ANK_REP_REGION domain-containing protein. | 0.640 |
| ned-8 | ikb-1 | F45H11.2.1 | C04F12.3.1 | NEDD8; Ubiquitin-like protein which plays an important role in cell cycle control and embryogenesis. Covalent attachment to its substrates requires prior activation by the E1 complex uba-3-ula-1 and linkage to the E2 enzyme ubc-12. Attachment of ned-8 to cullins activates their associated E3 ubiquitin ligase activity, and thus promotes polyubiquitination and proteasomal degradation of cyclins and other regulatory proteins. | ANK_REP_REGION domain-containing protein. | 0.618 |
| ned-8 | ubq-2 | F45H11.2.1 | ZK1010.1.1 | NEDD8; Ubiquitin-like protein which plays an important role in cell cycle control and embryogenesis. Covalent attachment to its substrates requires prior activation by the E1 complex uba-3-ula-1 and linkage to the E2 enzyme ubc-12. Attachment of ned-8 to cullins activates their associated E3 ubiquitin ligase activity, and thus promotes polyubiquitination and proteasomal degradation of cyclins and other regulatory proteins. | Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] | 0.940 |
| pik-1 | ikb-1 | K09B11.1a.2 | C04F12.3.1 | Pelle-like serine/threonine-protein kinase pik-1; Through association with the adapter actl-1, may act downstream of the receptor complex composed of ilcr-1 and ilcr-2, which is a signaling complex that modulates neuronal activity and animal behavior in response to sensory neuron input. | ANK_REP_REGION domain-containing protein. | 0.923 |
| pik-1 | tol-1 | K09B11.1a.2 | C07F11.1.1 | Pelle-like serine/threonine-protein kinase pik-1; Through association with the adapter actl-1, may act downstream of the receptor complex composed of ilcr-1 and ilcr-2, which is a signaling complex that modulates neuronal activity and animal behavior in response to sensory neuron input. | TIR domain-containing protein. | 0.919 |
| pik-1 | trf-1 | K09B11.1a.2 | F45G2.6.1 | Pelle-like serine/threonine-protein kinase pik-1; Through association with the adapter actl-1, may act downstream of the receptor complex composed of ilcr-1 and ilcr-2, which is a signaling complex that modulates neuronal activity and animal behavior in response to sensory neuron input. | TNF Receptor Associated Factor (TRAF) homolog. | 0.904 |
| prk-2 | ikb-1 | F45H7.4.2 | C04F12.3.1 | Serine/threonine-protein kinase prk-2; Involved in the negative regulation of synaptic differentiation in PLM neurons; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. PIM subfamily. | ANK_REP_REGION domain-containing protein. | 0.652 |
page 1 of 2