STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C05C9.1Uncharacterized protein. (478 aa)    
Predicted Functional Partners:
C06E8.5
Uncharacterized protein.
      
 0.884
F10D11.6
BPI2 domain-containing protein.
   
  
 0.856
F44A2.3
Uncharacterized protein.
      
 0.811
nrf-5
Nose resistant to fluoxetine protein 5; Plays a role in the uptake of a range of molecules including phosphatidylserine, lipids and xenobiotic compounds from the intestine to surrounding tissues. Possesses lipid transfer activity. Mediates transport of lipids from intestine to reproductive tract. Binds phosphatidylserine. Plays a role in efficient clearance of cell corpses by mediating phosphatidylserine appearance on phagocytic cells, thus promoting phagocytic engulfment of apoptotic cells. Vital for embryonic development.
      
 0.660
C34F6.1
Uncharacterized protein.
   
    0.538
F49E10.2
Uncharacterized protein.
   
    0.538
R05G6.9
Uncharacterized protein.
   
    0.468
F01G10.10
Uncharacterized protein.
   
  
0.448
ZC513.2
Uncharacterized protein.
   
 
  0.438
C06G1.1
BPI2 domain-containing protein.
   
  
0.431
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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