Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| C06A5.8 | T01C3.3 | C06A5.8a.2 | T01C3.3.1 | RING-type domain-containing protein. | RING-type domain-containing protein. | 0.912 |
| C06A5.8 | Y54E5A.7 | C06A5.8a.2 | Y54E5A.7a.1 | RING-type domain-containing protein. | Uncharacterized protein. | 0.826 |
| C06A5.8 | aipr-1 | C06A5.8a.2 | C56C10.10.1 | RING-type domain-containing protein. | Aryl hydrocarbon receptor Interacting Protein (AIP) Related. | 0.714 |
| C06A5.8 | gras-1 | C06A5.8a.2 | F30F8.3.1 | RING-type domain-containing protein. | PDZ domain-containing protein. | 0.858 |
| C06A5.8 | hip-1 | C06A5.8a.2 | T12D8.8.2 | RING-type domain-containing protein. | TPR_REGION domain-containing protein. | 0.741 |
| C06A5.8 | kca-1 | C06A5.8a.2 | C10H11.10.1 | RING-type domain-containing protein. | Kinesin 1 cargo adaptor alternative variant a. | 0.768 |
| C06A5.8 | puf-5 | C06A5.8a.2 | F54C9.8.1 | RING-type domain-containing protein. | Pumilio domain-containing protein 5; RNA-binding protein that binds to the consensus sequence 5'- CUCUGUAUCUUGU-3' in mRNA 3'-UTRs and modulates mRNA expression and stability. Functions redundantly with puf-6 and puf-7 in oocyte formation and organization, early embryonic cell divisions, and repression of expression of glp-1 and other maternal mRNAs in late oogenesis. | 0.694 |
| C06A5.8 | ubc-16 | C06A5.8a.2 | Y54E5B.4.1 | RING-type domain-containing protein. | Ubiquitin-conjugating enzyme E2 W; Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins (By similarity). Together with ubc-18, required for the ubiquitination of membranous organelles, and the removal of paternal mitochondria from early embryos. | 0.749 |
| C06A5.8 | ubc-6 | C06A5.8a.2 | D1022.1a.1 | RING-type domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.745 |
| C06A5.8 | uev-1 | C06A5.8a.2 | F39B2.2.1 | RING-type domain-containing protein. | Ubiquitin-conjugating enzyme E2 variant 1; Involved in protein ubiquitination, but has no ubiquitin ligase activity on its own. The uev-1-ubc-13 heterodimer catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through Lys-63. Involved in sorting Lys-63-linked polyubiquitinated maternal membrane proteins for degradation by targeting to multivesicular bodies. Required for glr-1-containing glutamate receptor trafficking in neurons. May have a role in synaptic transmission at motorneurons. May be involved in the ubiquitination and growth of intracellular polygluta [...] | 0.678 |
| T01C3.3 | C06A5.8 | T01C3.3.1 | C06A5.8a.2 | RING-type domain-containing protein. | RING-type domain-containing protein. | 0.912 |
| T01C3.3 | Y54E5A.7 | T01C3.3.1 | Y54E5A.7a.1 | RING-type domain-containing protein. | Uncharacterized protein. | 0.817 |
| T01C3.3 | aipr-1 | T01C3.3.1 | C56C10.10.1 | RING-type domain-containing protein. | Aryl hydrocarbon receptor Interacting Protein (AIP) Related. | 0.722 |
| T01C3.3 | gras-1 | T01C3.3.1 | F30F8.3.1 | RING-type domain-containing protein. | PDZ domain-containing protein. | 0.865 |
| T01C3.3 | hip-1 | T01C3.3.1 | T12D8.8.2 | RING-type domain-containing protein. | TPR_REGION domain-containing protein. | 0.741 |
| T01C3.3 | kca-1 | T01C3.3.1 | C10H11.10.1 | RING-type domain-containing protein. | Kinesin 1 cargo adaptor alternative variant a. | 0.847 |
| T01C3.3 | puf-5 | T01C3.3.1 | F54C9.8.1 | RING-type domain-containing protein. | Pumilio domain-containing protein 5; RNA-binding protein that binds to the consensus sequence 5'- CUCUGUAUCUUGU-3' in mRNA 3'-UTRs and modulates mRNA expression and stability. Functions redundantly with puf-6 and puf-7 in oocyte formation and organization, early embryonic cell divisions, and repression of expression of glp-1 and other maternal mRNAs in late oogenesis. | 0.999 |
| T01C3.3 | ubc-16 | T01C3.3.1 | Y54E5B.4.1 | RING-type domain-containing protein. | Ubiquitin-conjugating enzyme E2 W; Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins (By similarity). Together with ubc-18, required for the ubiquitination of membranous organelles, and the removal of paternal mitochondria from early embryos. | 0.732 |
| T01C3.3 | ubc-6 | T01C3.3.1 | D1022.1a.1 | RING-type domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.734 |
| T01C3.3 | uev-1 | T01C3.3.1 | F39B2.2.1 | RING-type domain-containing protein. | Ubiquitin-conjugating enzyme E2 variant 1; Involved in protein ubiquitination, but has no ubiquitin ligase activity on its own. The uev-1-ubc-13 heterodimer catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through Lys-63. Involved in sorting Lys-63-linked polyubiquitinated maternal membrane proteins for degradation by targeting to multivesicular bodies. Required for glr-1-containing glutamate receptor trafficking in neurons. May have a role in synaptic transmission at motorneurons. May be involved in the ubiquitination and growth of intracellular polygluta [...] | 0.660 |
page 1 of 5