STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
erp-44.2Endoplasmic reticulum resident protein 44.2. (413 aa)    
Predicted Functional Partners:
dnj-20
DnaJ homolog dnj-20.
   
 
 0.643
dnj-7
DNaJ domain (Prokaryotic heat shock protein).
   
 
 0.497
Y71G12B.6
NAD(P)-bd_dom domain-containing protein.
   
    0.497
dnj-28
DNaJ domain (Prokaryotic heat shock protein).
   
 
 0.479
rer-1
Protein RER1 homolog; May be involved in protein transport along the secretory pathway; Belongs to the RER1 family.
   
 
 0.478
fkb-3
Peptidylprolyl isomerase.
   
 
 0.463
msra-1
PMSR domain-containing protein.
   
 
 0.451
prdx-2
Thioredoxin domain-containing protein.
  
 
 0.448
prdx-3
Probable peroxiredoxin prdx-3; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides and as sensor of hydrogen peroxide-mediated signaling events; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.448
ero-1
Endoplasmic reticulum oxidoreductin-1; Oxidoreductase involved in disulfide bond formation in the endoplasmic reticulum. Efficiently reoxidizes pdi-1, the enzyme catalyzing protein disulfide formation, in order to allow pdi-1 to sustain additional rounds of disulfide formation. Following pdi reoxidation, passes its electrons to molecular oxygen via FAD, leading to the production of reactive oxygen species (ROS) in the cell (By similarity).
   
 
 0.438
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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