STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C09D4.1Uncharacterized MFS-type transporter C09D4.1; Belongs to the major facilitator superfamily. Feline leukemia virus subgroup C receptor (TC 2.A.1.28.1) family. (586 aa)    
Predicted Functional Partners:
marc-3
RING-CH-type domain-containing protein.
      
 0.920
ZK795.3
Brix domain-containing protein ZK795.3.
      
 0.891
C27A7.1
Ectonucleotide pyrophosphatase/phosphodiesterase C27A7.1; Probable phosphodiesterase.
   
  
 0.818
did-2
Doa4-Independent Degradation, homologous to yeast Did2.
      
 0.811
tbc-18
TBC (Tre-2/Bub2/Cdc16) domain family.
   
  
 0.803
scpl-1
CTD small phosphatase-like protein 1; Phosphatase which may play a role in the egg laying muscles.
      
 0.699
sqv-5
Chondroitin sulfate synthase sqv-5; Has both beta-1,3-glucuronic acid and beta-1,4-N- acetylgalactosamine transferase activity. The beta- 1,3-glucuronic acid transferase activity is controversial as it is not detected using the purified recombinant enzyme. Adds the first N-acetylgalactosamine(GalNAc) to initiate the chondroitin chain. Transfers glucuronic acid (GlcUA) from UDP-GlcUA and GalNAc from UDP-GalNAc to the non-reducing end of the elongating chondroitin polymer. Together with mig-22, required for chondroitin synthesis. Plays a role in early embryonic development by controlling [...]
      
 0.698
tag-30
BTB domain-containing protein.
      
 0.666
soap-1
Sorting Of Apical Proteins.
      
 0.560
hpo-9
BTB domain-containing protein.
      
 0.539
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.