STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C09F12.2Uncharacterized protein. (604 aa)    
Predicted Functional Partners:
F57B10.5
GOLD domain-containing protein.
   
 
 0.518
F13D11.4
3Beta_HSD domain-containing protein; Belongs to the 3-beta-HSD family.
   
 
 0.496
mrpl-49
Probable 39S ribosomal protein L49, mitochondrial.
   
 
 0.491
mrps-16
Probable 28S ribosomal protein S16, mitochondrial; Belongs to the bacterial ribosomal protein bS16 family.
   
 
 0.488
mrpl-34
L51_S25_CI-B8 domain-containing protein.
    
 
 0.482
mrpl-36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.482
mrps-15
28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.
   
   0.481
mrps-12
Mitochondrial Ribosomal Protein, Small; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.481
nduo-4
NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
    
 
 0.479
mrps-2
Mitochondrial Ribosomal Protein, Small.
   
   0.478
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.