STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C09F12.3G_PROTEIN_RECEP_F1_2 domain-containing protein. (394 aa)    
Predicted Functional Partners:
C03G6.5
UPF0376 protein C03G6.5.
   
  
 0.851
T08H10.1
Aldo_ket_red domain-containing protein.
      
 0.802
H09G03.1
Uncharacterized protein.
      
 0.669
F41E7.1
Na_H_Exchanger domain-containing protein.
      
 0.660
fbxa-183
F-box domain-containing protein.
      
 0.660
T05D4.3
Uncharacterized protein.
      
 0.660
T25C8.1
FGGY_N domain-containing protein.
      
 0.660
K11D12.9
RING-type domain-containing protein.
   
  
 0.620
dhhc-2
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.537
C53B4.1
MFS domain-containing protein.
      
 0.467
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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