STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C16C2.4BSD domain-containing protein. (361 aa)    
Predicted Functional Partners:
ocrl-1
Rho-GAP domain-containing protein.
 
 
    0.523
T20B12.3
Uncharacterized protein T20B12.3; Belongs to the CBF/MAK21 family.
   
  
 0.490
dhs-24
DeHydrogenases, Short chain.
      
 0.478
pinn-1
Peptidyl-prolyl cis-trans isomerase.
    
   0.469
eif-2gamma
Tr-type G domain-containing protein.
   
  
 0.429
reps-1
REPS (RalBP1-associated Eps domain-containing protein) homolog.
      
 0.407
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.