Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C16E9.1 | C18H7.1 | C16E9.1.1 | C18H7.1a.1 | Uncharacterized protein. | VWFA domain-containing protein. | 0.660 |
C16E9.1 | F21D5.3 | C16E9.1.1 | F21D5.3a.2 | Uncharacterized protein. | Plastocyanin-like domain-containing protein. | 0.507 |
C16E9.1 | ctbp-1 | C16E9.1.1 | F49E10.5a.1 | Uncharacterized protein. | C-terminal-binding protein 1; Binds DNA and represses gene expression. Plays a role in regulation of life span, possibly by regulating transcription of genes important for lipid metabolism. | 0.556 |
C16E9.1 | famk-1 | C16E9.1.1 | H03A11.1.1 | Uncharacterized protein. | Extracellular serine/threonine protein kinase CeFam20; Golgi serine/threonine protein kinase that phosphorylates secretory pathway proteins within Ser-x-Glu/pSer motifs. Belongs to the FAM20 family. | 0.501 |
C16E9.1 | klf-3 | C16E9.1.1 | F54H5.4b.1 | Uncharacterized protein. | Kruppel-Like Factor (Zinc finger protein). | 0.559 |
C16E9.1 | pvf-1 | C16E9.1.1 | Y39A3CL.6.1 | Uncharacterized protein. | PDGF_2 domain-containing protein. | 0.510 |
C16E9.1 | rps-22 | C16E9.1.1 | F53A3.3a.2 | Uncharacterized protein. | Ribosomal Protein, Small subunit; Belongs to the universal ribosomal protein uS8 family. | 0.499 |
C16E9.1 | rps-30 | C16E9.1.1 | C26F1.4.3 | Uncharacterized protein. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.804 |
C16E9.1 | ttn-1 | C16E9.1.1 | W06H8.8f.1 | Uncharacterized protein. | Titin homolog; Serine/threonine-protein kinase. Key component in the assembly and functioning of muscles. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase (By similarity). | 0.510 |
C16E9.1 | zmp-3 | C16E9.1.1 | C31B8.8.1 | Uncharacterized protein. | Matrix metalloproteinase-C; Metalloproteinase. | 0.512 |
C18H7.1 | C16E9.1 | C18H7.1a.1 | C16E9.1.1 | VWFA domain-containing protein. | Uncharacterized protein. | 0.660 |
C18H7.1 | ctbp-1 | C18H7.1a.1 | F49E10.5a.1 | VWFA domain-containing protein. | C-terminal-binding protein 1; Binds DNA and represses gene expression. Plays a role in regulation of life span, possibly by regulating transcription of genes important for lipid metabolism. | 0.439 |
C18H7.1 | klf-3 | C18H7.1a.1 | F54H5.4b.1 | VWFA domain-containing protein. | Kruppel-Like Factor (Zinc finger protein). | 0.474 |
C18H7.1 | pvf-1 | C18H7.1a.1 | Y39A3CL.6.1 | VWFA domain-containing protein. | PDGF_2 domain-containing protein. | 0.510 |
C18H7.1 | rps-22 | C18H7.1a.1 | F53A3.3a.2 | VWFA domain-containing protein. | Ribosomal Protein, Small subunit; Belongs to the universal ribosomal protein uS8 family. | 0.499 |
C18H7.1 | rps-30 | C18H7.1a.1 | C26F1.4.3 | VWFA domain-containing protein. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.804 |
C18H7.1 | ttn-1 | C18H7.1a.1 | W06H8.8f.1 | VWFA domain-containing protein. | Titin homolog; Serine/threonine-protein kinase. Key component in the assembly and functioning of muscles. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase (By similarity). | 0.510 |
F21D5.3 | C16E9.1 | F21D5.3a.2 | C16E9.1.1 | Plastocyanin-like domain-containing protein. | Uncharacterized protein. | 0.507 |
F21D5.3 | famk-1 | F21D5.3a.2 | H03A11.1.1 | Plastocyanin-like domain-containing protein. | Extracellular serine/threonine protein kinase CeFam20; Golgi serine/threonine protein kinase that phosphorylates secretory pathway proteins within Ser-x-Glu/pSer motifs. Belongs to the FAM20 family. | 0.510 |
ctbp-1 | C16E9.1 | F49E10.5a.1 | C16E9.1.1 | C-terminal-binding protein 1; Binds DNA and represses gene expression. Plays a role in regulation of life span, possibly by regulating transcription of genes important for lipid metabolism. | Uncharacterized protein. | 0.556 |
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