STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C17D12.3Uncharacterized protein. (418 aa)    
Predicted Functional Partners:
Y38E10A.14
Uncharacterized protein.
      
 0.904
clec-75
C-type lectin domain-containing protein.
   
  
 0.887
spp-17
Saposin B-type domain-containing protein.
      
 0.758
ilys-5
Invertebrate LYSozyme.
      
 0.693
C29F9.6
TAZ-type domain-containing protein.
    
 
 0.674
fbxa-189
F-box domain-containing protein.
    
 
 0.670
Y105C5A.8
Uncharacterized protein.
      
 0.660
fbxa-78
F-box domain-containing protein.
      
 0.660
Y45F10D.6
Uncharacterized protein.
    
 
 0.660
Y47H9A.1
annotation not available
   
   
0.578
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.